diff options
-rw-r--r-- | ml_exp/frob_norm.py | 51 | ||||
-rw-r--r-- | ml_exp/kernels.py (renamed from ml_exp/gauss_kernel.py) | 0 | ||||
-rw-r--r-- | ml_exp/math.py (renamed from ml_exp/cholesky_solve.py) | 32 |
3 files changed, 30 insertions, 53 deletions
diff --git a/ml_exp/frob_norm.py b/ml_exp/frob_norm.py deleted file mode 100644 index 4c3a2945d..000000000 --- a/ml_exp/frob_norm.py +++ /dev/null @@ -1,51 +0,0 @@ -"""MIT License - -Copyright (c) 2019 David Luevano Alvarado - -Permission is hereby granted, free of charge, to any person obtaining a copy -of this software and associated documentation files (the "Software"), to deal -in the Software without restriction, including without limitation the rights -to use, copy, modify, merge, publish, distribute, sublicense, and/or sell -copies of the Software, and to permit persons to whom the Software is -furnished to do so, subject to the following conditions: - -The above copyright notice and this permission notice shall be included in all -copies or substantial portions of the Software. - -THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR -IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, -FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE -AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER -LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, -OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE -SOFTWARE. -""" -import math - - -def frob_norm(array): - """ - Calculates the frobenius norm of a given array or matrix. - array: array of data. - """ - - arr_sh_len = len(array.shape) - arr_range = range(len(array)) - fn = 0.0 - - # If it is a 'vector'. - if arr_sh_len == 1: - for i in arr_range: - fn += array[i]*array[i] - - return math.sqrt(fn) - - # If it is a matrix. - elif arr_sh_len == 2: - for i in arr_range: - for j in arr_range: - fn += array[i, j]*array[i, j] - - return math.sqrt(fn) - else: - print('Error. Array size greater than 2 ({}).'.format(arr_sh_len)) diff --git a/ml_exp/gauss_kernel.py b/ml_exp/kernels.py index 834d62408..834d62408 100644 --- a/ml_exp/gauss_kernel.py +++ b/ml_exp/kernels.py diff --git a/ml_exp/cholesky_solve.py b/ml_exp/math.py index bc6a572a3..781985118 100644 --- a/ml_exp/cholesky_solve.py +++ b/ml_exp/math.py @@ -21,7 +21,35 @@ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. """ import numpy as np -from numpy.linalg import cholesky +import math + + +def frob_norm(array): + """ + Calculates the frobenius norm of a given array or matrix. + array: array of data. + """ + + arr_sh_len = len(array.shape) + arr_range = range(len(array)) + fn = 0.0 + + # If it is a 'vector'. + if arr_sh_len == 1: + for i in arr_range: + fn += array[i]*array[i] + + return math.sqrt(fn) + + # If it is a matrix. + elif arr_sh_len == 2: + for i in arr_range: + for j in arr_range: + fn += array[i, j]*array[i, j] + + return math.sqrt(fn) + else: + print('Error. Array size greater than 2 ({}).'.format(arr_sh_len)) def cholesky_solve(K, y): @@ -36,7 +64,7 @@ def cholesky_solve(K, y): K[np.diag_indices_from(K)] += 1e-8 # Get the Cholesky decomposition of the kernel. - L = cholesky(K) + L = np.linalg.cholesky(K) size = len(L) # Solve Lx=y for x. |