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authorDavid Luevano <55825613+luevano@users.noreply.github.com>2019-12-12 19:38:23 -0700
committerDavid Luevano <55825613+luevano@users.noreply.github.com>2019-12-12 19:38:23 -0700
commitc2b15a51e80a051fe9dbc2e558937f54bf4a459c (patch)
tree878f28debb120fa7c666e9758fe1b04e58c6c619 /main.py
parent5ac02bfda4b3ff0700344a1b8757ec3d586ea7a5 (diff)
Reformat data reading
Diffstat (limited to 'main.py')
-rw-r--r--main.py20
1 files changed, 3 insertions, 17 deletions
diff --git a/main.py b/main.py
index 88734d57f..f37054b3b 100644
--- a/main.py
+++ b/main.py
@@ -20,34 +20,20 @@ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
"""
-import os
import time
from misc import printc
# import matplotlib.pyplot as plt
-from read_nc_data import read_nc_data
-from read_db_edata import read_db_edata
from c_matrix import c_matrix_multiple
from lj_matrix import lj_matrix_multiple
from do_ml import do_ml
+from read_qm7_data import read_qm7_data
# Initialization time.
init_time = time.perf_counter()
# Data reading.
-tic = time.perf_counter()
-printc('Data reading started.', 'CYAN')
-
-init_path = os.getcwd()
-os.chdir('data')
-data_path = os.getcwd()
-
-zi_data = read_nc_data(data_path)
-molecules, nuclear_charge, energy_pbe0, energy_delta = \
- read_db_edata(zi_data, data_path)
-
-os.chdir(init_path)
-toc = time.perf_counter()
-printc('\tData reading took {:.4f} seconds.'.format(toc-tic), 'GREEN')
+zi_data, molecules, nuclear_charge, energy_pbe0, energy_delta =\
+ read_qm7_data()
# Matrices calculation.
cm_data = c_matrix_multiple(molecules, nuclear_charge, as_eig=True)