From 759b48a965470ac18910951b2cb0599d371d1808 Mon Sep 17 00:00:00 2001
From: David Luevano Alvarado <55825613+luevano@users.noreply.github.com>
Date: Sat, 29 Feb 2020 07:46:27 -0700
Subject: bos to bob
---
ml_exp/do_ml.py | 13 ++++++-------
1 file changed, 6 insertions(+), 7 deletions(-)
diff --git a/ml_exp/do_ml.py b/ml_exp/do_ml.py
index d8ee415bf..3cb67675f 100644
--- a/ml_exp/do_ml.py
+++ b/ml_exp/do_ml.py
@@ -168,9 +168,8 @@ def do_ml(db_path='data',
compound.gen_am(use_forces=use_forces,
size=size,
bohr_ru=bohr_ru)
- if 'BOS' in identifiers:
- compound.gen_bos(size=size,
- stuff=stuff)
+ if 'BOB' in identifiers:
+ compound.gen_bob(size=size)
# Create a numpy array for the descriptors.
if 'CM' in identifiers:
@@ -179,8 +178,8 @@ def do_ml(db_path='data',
ljm_data = np.array([comp.ljm for comp in compounds], dtype=float)
if 'AM' in identifiers:
am_data = np.array([comp.cm for comp in compounds], dtype=float)
- if 'BOS' in identifiers:
- bos_data = np.array([comp.bos for comp in compounds], dtype=float)
+ if 'BOB' in identifiers:
+ bob_data = np.array([comp.bob for comp in compounds], dtype=float)
toc = time.perf_counter()
tictoc = toc - tic
@@ -212,8 +211,8 @@ def do_ml(db_path='data',
sigma=sigma,
identifier='CM',
show_msgs=show_msgs)
- if 'BOS' in identifiers:
- bos_mae, bos_tictoc = simple_ml(bos_data,
+ if 'BOB' in identifiers:
+ bob_mae, bob_tictoc = simple_ml(bob_data,
energy_pbe0,
training_size=training_size,
test_size=test_size,
--
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